Changes in urban development trajectories towards renewable energy sources and compact, energy- efficient urban agglomerations will have major impacts on ecosystem services, which cities are dependent on but tend to overlook. Such ecosystem services can be provisioning, regulating and cultural ecosystem services, around which competition over land and water resources will increase with energy system shifts. Much of the land and water use conflicts can be foreseen to take place within urbanising regions, which simultaneously is the living environment of a major part of the human population today. In order to inform critical policy decisions, integrated assessment of urban energy system options and ecosystem services is necessary. For this purpose, the model integration platform Land Evolution and impact Assessment Model (LEAM) is built and empowered with models representing urban form, energy supply and use, transportation, and ecological processes and services, all related to the land and water use evolution. These types of analyses of interacting sub- systems require an advanced model integration platform, yet open for learning and for further development, with high visualisation capacity. Case studies are performed for the cities of Stockholm, Chicago and Shanghai, where urbanisation scenarios are under development. In the case study LEAMStockholm, scenarios for urban compaction and urban sprawl with different energy and water system solutions are being developed, in order to explore the sustainability of urban policy options. This will enable integrated policy assessment of complex urban systems, with the goal to increase their sustainability.